Genomics
5 projects
Showing 5 of 5 projects
Bioinformatics
A curated list of awesome open-source bioinformatics software, libraries, and resources, primarily for command-line analysis.
#workflow-management#scientific-computing#command-line-tools
Stars4.0k
Forks703
Last commit17 days ago
STARC
A fast RNA-seq aligner for mapping spliced transcript sequences to a reference genome.
#transcriptomics#next-generation-sequencing#computational-biology
Stars2.2k
Forks546
Last commit1 year ago
deeplearning-biology
A curated list of deep learning implementations and resources for biological research, with a focus on genomics.
#deep-learning#single-cell-analysis#protein-structure-prediction
Stars2.1k
Forks490
Last commit1 month ago
TileDBC++
An embeddable C++ storage engine for dense and sparse multi-dimensional arrays, dataframes, and key-value stores.
#multi-dimensional-arrays#c-plus-plus-library#scientific-computing
Stars2.0k
Forks210
Last commit1 day ago
samtoolsC
A suite of command-line tools for manipulating SAM, BAM, and CRAM files in next-generation sequencing data analysis.
#command-line-tools#sequencing-data#genomics
Stars1.9k
Forks609
Last commit7 days ago
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