Dna

Nucleotide TransformerJupyter Notebook

A collection of transformer-based foundation models for genomics and transcriptomics, enabling tasks like sequence analysis, functional prediction, and conversational DNA exploration.

PolyGo

A Go package providing fast, reproducible computational tools for synthetic biology and organism engineering.

DNABERT-2Shell

A foundation model for multi-species genome understanding, achieving state-of-the-art performance on 28 genomic tasks.

GPN (Genomic Pre-trained Network)Jupyter Notebook

A collection of genomic language models for predicting variant effects and evolutionary constraints from DNA sequences.