Variant Calling
3 projects
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samtoolsC
A suite of command-line tools for manipulating SAM, BAM, and CRAM files in next-generation sequencing data analysis.
#command-line-tools#sequencing-data#genomics
Stars1.9k
Forks613
Last commit6 days ago
BcbioPython
A validated, scalable, community-developed pipeline for variant calling, RNA-seq, and small RNA analysis in genomic sequencing.
#community-driven#high-throughput-sequencing#genomics
Stars1.0k
Forks356
Last commit1 year ago
VcflibC++
A C++ library and command-line toolkit for parsing, manipulating, and analyzing VCF (Variant Call Format) files in bioinformatics.
#structural-variants#vcf-manipulation#command-line-tools
Stars679
Forks222
Last commit2 months ago
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Community-curated · Updated weekly · 100% open source
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