Open Science
Showing 21 of 57 projects
A curated list of software, tools, pipelines, and plugins for image analysis in biological research.
An R package to programmatically retrieve chemical information from various web databases and APIs.
A Python API for downloading and processing neuroanatomical atlas data from multiple sources.
A curated directory of open-source projects, tools, and resources for microscopy research and development.
A Julia package for reproducible data setup, automating dataset downloads and management for scientific computing.
An open platform for hosting and participating in data science challenges focused on open science and open data.
Automated 3D brain image registration tool for aligning sample data with anatomical atlases across multiple species.
A web application for visualizing astronomical HiPS data directly in the browser, embeddable in any webpage.
A PhD-level course on computational economics covering Python, Julia, and economic modeling techniques.
A Java-based 2D chemical structure editor and viewer built on the Chemistry Development Kit (CDK).
A deep learning-based, threshold-agnostic, subpixel-accurate 2D and 3D spot detection method for fluorescence microscopy and spatial transcriptomics.
Ember.js front-end application for the Open Science Framework (OSF) platform.
A functional bioinformatics library for Scala providing strongly-typed DNA/RNA/protein sequences, transcription, translation, and alignment utilities.
Replication package and dataset for a research paper on software architecture practices in ROS-based robotic systems.
An open-source Python suite for light microscopy acquisition, storage, visualization, and analysis, with strong support for single-molecule localization techniques.
An all-in-one MATLAB software suite for state-of-the-art processing and quantitative analysis of in-vivo magnetic resonance spectroscopy (MRS) data.
A curated list of software, datasets, and publications for image-based profiling of biological phenotypes in drug discovery and cell biology.
A curated list of software, datasets, and publications for image-based profiling of biological phenotypes in drug discovery and cell biology.
A cross-platform desktop application for curating and sharing biomedical research data and software according to FAIR guidelines.
A curated collection of resources for applying machine learning to biomedical and healthcare imaging applications.
An open-source solution for the Airbus Ship Detection Challenge, providing a benchmark and base for ship detection in satellite imagery.
Related Tags
Found a gem we're missing?
Open-Awesome is built by the community, for the community. Submit a project, suggest an awesome list, or help improve the catalog on GitHub.