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Molecular Modeling

13 projects

Showing 13 of 13 projects

DeepChem
DeepChemPython

An open-source Python library for applying deep learning to drug discovery, materials science, quantum chemistry, and biology.

#hacktoberfest#scientific-computing#cheminformatics
Stars6.9k
Forks2.3k
Last commit1 day ago
RDKit
RDKitHTML

A collection of cheminformatics and machine-learning software for molecular informatics, written in C++ with Python wrappers.

#cheminformatics#python-library#chemical-informatics
Stars3.6k
Forks1.0k
Last commit1 day ago
awesome-python-chemistry
awesome-python-chemistry

A curated list of awesome Python frameworks, libraries, software, and resources for chemistry and cheminformatics.

#scientific-computing#cheminformatics#simulation
Stars1.4k
Forks232
Last commit11 months ago
openbabel
openbabelC++

An open-source chemical toolbox for converting, analyzing, and manipulating molecular data across 90+ file formats.

#scientific-computing#cheminformatics#file-format-conversion
Stars1.4k
Forks482
Last commit3 days ago
DeepPurpose
DeepPurposeJupyter Notebook

A deep learning library for drug-target interaction, drug property, protein-protein interaction, drug-drug interaction, and protein function prediction in bioinformatics.

#cheminformatics#deep-learning#drug-target-interactions
Stars1.2k
Forks305
Last commit2 years ago
3Dmol.js
3Dmol.jsJupyter Notebook

WebGL-accelerated JavaScript library for interactive molecular visualization in web applications.

#scientific-visualization#3d-graphics#computational-biology
Stars1.0k
Forks225
Last commit5 days ago
Cheminformatics
Cheminformatics

A curated list of awesome cheminformatics software, libraries, resources, and tools, primarily command-line based and open-source.

#scientific-computing#cheminformatics#open-source
Stars881
Forks144
Last commit2 years ago
Chemistry Development Kit
Chemistry Development KitJava

An open-source Java library for cheminformatics and bioinformatics, providing algorithms for molecular representation, analysis, and data processing.

#code4lib#cheminformatics#java-library
Stars601
Forks178
Last commit4 days ago
Datamol
DatamolPython

A Python library for molecular processing built on RDKit with a simple API and good defaults.

#cheminformatics#python-library#molecule
Stars545
Forks65
Last commit3 months ago
datamol
datamolPython

A Python library for molecular processing built on RDKit with a simple API and good defaults.

#scientific-computing#cheminformatics#python-library
Stars545
Forks65
Last commit3 months ago
Cookiecutter for Computational Molecular Sciences
Cookiecutter for Computational Molecular SciencesPython

A Cookiecutter template for creating Python packages in computational molecular sciences with pre-configured CI, testing, and documentation.

#scientific-computing#pytest#python-packages
Stars459
Forks93
Last commit8 months ago
Indigo
IndigoC++

A universal cheminformatics toolkit with database search engines, a core library, and utilities for molecular processing.

#scientific-computing#cheminformatics#webassembly
Stars404
Forks131
Last commit1 day ago
MolecularGraph.jl
MolecularGraph.jlJulia

A Julia toolkit for graph-based molecule modeling, cheminformatics analysis, and chemical structure manipulation.

#julia#cheminformatics#graph
Stars227
Forks26
Last commit2 months ago

Related Tags

#Cheminformatics11#Bioinformatics8#Scientific Computing7#Chemistry7#Computational Chemistry6#Python6#Python Library5#Drug Discovery5#Open Science4#Molecule3#Rdkit3#Machine Learning3
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