Open-Awesome
CategoriesAlternativesStacksSelf-HostedExplore
Open-Awesome

© 2026 Open-Awesome. Curated for the developer elite.

TermsPrivacyAboutGitHubRSS
  1. Home
  2. Tags
  3. Rdkit

Rdkit

14 projects

Showing 14 of 14 projects

RDKit
RDKitHTML

A collection of cheminformatics and machine-learning software for molecular informatics, written in C++ with Python wrappers.

#cheminformatics#python-library#chemical-informatics
Stars3.5k
Forks1.0k
Last commit6 hours ago
MOSES
MOSESPython

A benchmarking platform for molecular generation models, providing datasets, implementations, and evaluation metrics for drug discovery research.

#molecular-generation#cheminformatics#deep-learning
Stars979
Forks280
Last commit2 years ago
JTVAE
JTVAEPython

A junction tree variational autoencoder for generating valid molecular graphs with desired chemical properties.

#molecular-generation#graph-neural-networks#variational-autoencoder
Stars561
Forks196
Last commit3 years ago
Datamol
DatamolPython

A Python library for molecular processing built on RDKit with a simple API and good defaults.

#cheminformatics#python-library#molecule
Stars539
Forks63
Last commit1 month ago
datamol
datamolPython

A Python library for molecular processing built on RDKit with a simple API and good defaults.

#scientific-computing#cheminformatics#python-library
Stars539
Forks63
Last commit1 month ago
GuacaMol
GuacaMolPython

A Python package for benchmarking generative models in de novo molecular design.

#cheminformatics#generative-chemistry#open-science
Stars525
Forks99
Last commit2 years ago
Molecular Transformer
Molecular TransformerPython

A sequence-to-sequence transformer model for predicting chemical reaction pathways (retrosynthesis) with uncertainty calibration.

#retrosynthesis#reaction-prediction#transformer-model
Stars426
Forks83
Last commit4 years ago
mol2vec
mol2vecPython

An unsupervised machine learning approach to learn vector representations of molecular substructures for cheminformatics.

#cheminformatics#chemical-representation#vector-embeddings
Stars291
Forks121
Last commit3 years ago
DescriptaStorus
DescriptaStorusPython

A Python library for fast random access to chemical descriptors and molecule indices, optimized for machine learning workflows.

#cheminformatics#data-storage#python-library
Stars281
Forks67
Last commit1 year ago
ChEMBL_Structure_Pipeline (formerly standardiser)
ChEMBL_Structure_Pipeline (formerly standardiser)Python

Standardizes and processes chemical molecule structures for the ChEMBL database using RDKit.

#molecule-standardization#cheminformatics#python-library
Stars244
Forks44
Last commit7 months ago
RDchiral
RDchiralJupyter Notebook

A Python wrapper for RDKit's RunReactants that improves stereochemistry handling in chemical reaction applications.

#cheminformatics#reaction-simulation#rdkit
Stars187
Forks59
Last commit2 years ago
rdeditor
rdeditorPython

A simple, open-source graphical molecule editor built with RDKit and PySide6 for chemical structure drawing and editing.

#desktop-application#cheminformatics#molecule-editor
Stars179
Forks38
Last commit1 month ago
rd_filters
rd_filtersPython

A Python script to filter chemical compounds using structural alerts from ChEMBL and property filters from RDKit.

#cheminformatics#chembl#chemical-informatics
Stars167
Forks44
Last commit4 months ago
confgen
confgenHTML

A web application for generating small ligand conformers for molecular docking using RDKit.

#cheminformatics#molecular-docking#rdkit
Stars8
Forks0
Last commit5 months ago

Related Tags

#Cheminformatics12#Drug Discovery7#Python7#Machine Learning7#Python Library6#Computational Chemistry4#Bioinformatics4#Chemical Informatics4#Pytorch3#Molecular Modeling3#Data Processing3
Community-curated · Updated weekly · 100% open source

Found a gem we're missing?

Open-Awesome is built by the community, for the community. Submit a project, suggest an awesome list, or help improve the catalog on GitHub.

Submit a projectStar on GitHub