Fiji Plugin
5 projects
Showing 5 of 5 projects
TrackMateJava
An open and extensible Fiji plugin for single-particle tracking in life-science microscopy images.
#image-analysis#microscopy#extensible-platform
Stars238
Forks87
Last commit1 day ago
Trainable Weka SegmentationJava
A Fiji plugin for pixel-based image segmentation using Weka machine learning algorithms and image features.
#scientific-computing#bioimage-analysis#microscopy
Stars125
Forks63
Last commit1 year ago
BoneJJava
A collection of Fiji/ImageJ plugins for trabecular geometry and whole bone shape analysis in skeletal biology.
#scientific-computing#image-analysis#trabecular-geometry
Stars29
Forks12
Last commit1 month ago
Z-stack Depth Color CodeJava
An ImageJ/FIJI plugin that color-codes Z-stack microscopy images by depth using LUTs for enhanced 3D visualization.
#scientific-visualization#microscopy#3d-visualization
Stars25
Forks7
Last commit
MIAJava
A modular ImageJ/Fiji plugin for assembling image and object analysis workflows with batch processing capabilities.
#image-analysis#batch-processing#modular
Stars17
Forks3
Last commit14 days ago
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