Cell Tracking
4 projects
Showing 4 of 4 projects
MicroSAMJupyter Notebook
Interactive segmentation and tracking tools for microscopy images built on Segment Anything.
#bioimage-analysis#microscopy#segment-anything
Stars684
Forks102
Last commit3 days ago
DeepCellPython
A deep learning library for single-cell analysis of biological images, specializing in cell segmentation and tracking.
#bioimage-analysis#instance-segmentation#python-library
Stars473
Forks107
Last commit1 year ago
UsiigaciJupyter Notebook
A semi-automated pipeline for instance-aware cell segmentation, tracking, and migration analysis in phase contrast microscopy using Mask R-CNN.
#biomedical-research#bioimage-analysis#resnet-101
Stars205
Forks70
Last commit5 years ago
UltrackPython
A scalable cell tracking method for 2D, 3D, and multichannel timelapse recordings, robust under segmentation uncertainty.
#timelapse#bioimage-analysis#fiji
Stars177
Forks26
Last commit17 days ago
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