R

RStudio Addinsdaattali/addinslist

A curated list and interactive browser for discovering and installing RStudio addins.

ChIP-seq analysis notes from Tommy Tangcrazyhottommy/ChIP-seq-analysis

A comprehensive collection of notes, tools, and resources for analyzing ChIP-seq and related epigenomic data.

slidify <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">ramnathv/slidify

Generate reproducible HTML5 slide decks from R Markdown for data-driven presentations.

rangerimbs-hl/ranger

A fast implementation of random forests for classification, regression, and survival analysis, optimized for high-dimensional data.

wafflehrbrmstr/waffle

An R package for creating waffle (square pie) charts and isotype pictograms using ggplot2.

lubridatetidyverse/lubridate

An R package that simplifies parsing, manipulating, and calculating with dates and times.

CellChatsqjin/CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell transcriptomics data.

engsoccerdatajalapic/engsoccerdata

An R package providing comprehensive historical soccer match datasets and analysis functions for European and MLS leagues.

ggmapdkahle/ggmap

An R package for retrieving and plotting raster map tiles from services like Google Maps and OpenStreetMap using ggplot2.

Rgeer-spatial/rgee

An R binding package for calling Google Earth Engine API from within R, integrating with the R spatial ecosystem.

staticdocshadley/staticdocs

Generate static HTML documentation websites for R packages with minimal configuration.

BreakoutDetection <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">twitter/BreakoutDetection

An R package for detecting statistically significant breakpoints in time series using robust energy statistics.

RHadoopRevolutionAnalytics/RHadoop

A collection of R packages for interacting with Hadoop ecosystems, enabling big data analysis from R.

reprexjennybc/reprex

An R package that creates reproducible examples from R code for sharing on GitHub, Stack Overflow, Slack, and other platforms.

shinyjsdaattali/shinyjs

Perform common JavaScript operations in Shiny apps to improve UX without writing JavaScript.

gluetidyverse/glue

Interpreted string literals for R that embed expressions in curly braces for easy data interpolation.

highcharterjbkunst/highcharter

An R wrapper for the Highcharts JavaScript library to create interactive and customizable charts from R objects.

historical-basemapsaourednik/historical-basemaps

A collection of georeferenced GeoJSON boundaries for world countries and cultural regions to map historical data on global or continental scales.

ggvis <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">rstudio/ggvis

An interactive grammar of graphics for R that combines ggplot2's grammar with reactive programming from Shiny.

formattable <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">renkun-ken/formattable

An R package for creating formattable vectors and data frames to enhance data presentation in reports and dynamic documents.

fuzzyjoindgrtwo/fuzzyjoin

An R package for joining data frames on inexact matching using string distance, regex, numeric tolerance, and other fuzzy criteria.

perpetualperpetual-ml/perpetual

A hyperparameter-free gradient boosting machine with a simple budget parameter, built for high performance with Rust and bindings for Python and R.

lme4 <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">lme4/lme4

An R package for fitting linear, generalized, and nonlinear mixed-effects models using S4 classes and RcppEigen.

ggalthrbrmstr/ggalt

A collection of extra coordinate systems, geoms, statistical transformations, scales, and fonts for the ggplot2 R package.

timevisdaattali/timevis

An R package for creating rich, interactive timeline visualizations in Shiny apps and R Markdown documents.

dash-cytoscapeplotly/dash-cytoscape

A Dash component library for creating interactive and customizable network visualizations in Python and R, powered by Cytoscape.js.

R Language ServerREditorSupport/languageserver

An implementation of the Language Server Protocol (LSP) for the R programming language.

RStartHererstudio/RStartHere

A curated guide to essential R packages organized by their role in the data science workflow.

stringr <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">hadley/stringr

A cohesive set of functions for string manipulation in R, built on stringi with consistent and user-friendly design.

Harmonyimmunogenomics/harmony

Fast, sensitive, and accurate integration of single-cell RNA-seq data across multiple datasets, batches, or experimental conditions.

roxygen <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">klutometis/roxygen

Generate R package documentation and NAMESPACE files from inline R comments.

SparkR <img class="emoji" alt="heart" src="https://cdn.jsdelivr.net/gh/qinwf/awesome-R@3c66da6e291bcc0520b1649125b0bed750896a9a/heart.png" height="20" align="absmiddle" width="20">amplab-extras/SparkR-pkg

An R package providing a lightweight frontend to use Apache Spark for distributed data processing from R.

vroomr-lib/vroom

The fastest delimited file reader for R, using lazy loading and multi-threading to achieve speeds over 1 GB/sec.

CSFjianboqi/CSF

An airborne LiDAR point cloud ground filtering method based on cloth simulation for bare earth extraction.

echarts4rJohnCoene/echarts4r

An R interface to Apache ECharts for creating interactive charts and visualizations.

rioleeper/rio

An R package that simplifies data import and export by automatically selecting the correct function based on file extension.