Tissue Imaging
3 projects
Showing 3 of 3 projects
SquidpyPython
A scalable Python toolkit for analyzing and visualizing spatial molecular data from tissue sections.
#image-analysis#single-cell-analysis#single-cell-rna-seq
Stars577
Forks116
Last commit22 hours ago
MAPSJupyter Notebook
A machine learning approach for rapid, pathologist-level cell type annotation from spatial proteomics data like MIBI and CODEX.
#cell-type-annotation#computational-pathology#codex
Stars66
Forks10
Last commit2 years ago
MinervaHTML
A lightweight image viewer for non-experts to interactively explore complex multiplexed tissue images.
#scientific-visualization#microscopy#spatial-biology
Stars58
Forks14
Last commit2 years ago
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