Sequence Modeling

awesome-rnn: list of resources (GitHub Repo)

A curated list of resources dedicated to recurrent neural networks (RNNs) and deep learning.

rnnLua

A Recurrent Neural Network library for Torch7's nn, providing RNN, LSTM, GRU, and other sequence modeling modules.

HMM in TensorFlowJupyter Notebook

TensorFlow and NumPy implementations of HMM Viterbi and forward/backward algorithms for sequence modeling.

TransformerCPIPython

A deep learning model using transformer architecture to predict compound-protein interactions from molecular and protein sequences.