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Protein Structure

7 projects

Showing 7 of 7 projects

biopython
biopythonPython

Official git repository for Biopython (originally converted from CVS)

#protein-structure#phylogenetics#protein
Stars5.2k
Forks2.0k
Last commit1 day ago
Boltz-1
Boltz-1Python

A family of open-source deep learning models for accurate biomolecular interaction and binding affinity prediction, rivaling AlphaFold3 and physics-based methods.

#binding prediction#binding-affinity#protein-structure
Stars4.2k
Forks906
Last commit4 months ago
OpenFold
OpenFoldPython

A trainable, memory-efficient PyTorch reproduction of AlphaFold 2 for protein structure prediction.

#alphafold2#protein-structure#deep-learning
Stars3.4k
Forks693
Last commit9 months ago
TAPE (Tasks Assessing Protein Embeddings)
TAPE (Tasks Assessing Protein Embeddings)Python

A benchmark for evaluating protein language models through five biologically relevant semi-supervised learning tasks.

#protein-structure#deep-learning#language-model
Stars745
Forks134
Last commit3 years ago
pdb-tools
pdb-toolsPython

A dependency-free cross-platform Swiss Army knife for manipulating and editing Protein Data Bank (PDB) files.

#scientific-computing#command-line-tools#pdb-manipulation
Stars458
Forks122
Last commit3 months ago
Awesome AI-based Protein Design
Awesome AI-based Protein Design

A curated collection of research papers tracking the frontier of AI-based protein design methods and applications.

#biotechnology#protein-structure#research-papers
Stars318
Forks21
Last commit2 years ago
awesome-molecular-docking
awesome-molecular-docking

A curated list of resources for molecular docking, protein-protein docking, and related computational biology tasks.

#cheminformatics#ai-aided-drug-discovery#protein-structure
Stars106
Forks8
Last commit3 years ago

Related Tags

#Bioinformatics7#Computational Biology5#Machine Learning4#Drug Discovery3#Structural Biology3#Protein3#Deep Learning3
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