Precision Medicine

PrimeKGJupyter Notebook

A biomedical knowledge graph integrating 20 resources to describe 17,080 diseases with over 4 million relationships across ten biological scales.

dgidbRuby

A Ruby on Rails web application for querying and exploring drug-gene interaction data from The Genome Institute's database.

TypeDB OSI - Biomedical Knowledge GraphPython

An open-source biomedical knowledge graph for drug discovery, precision medicine, and drug repurposing research.

MOFGCNPython

A deep learning model that predicts drug response by fusing multi-omics data with graph convolutional networks.

drGATJupyter Notebook

Attention-based GNN model for predicting drug sensitivity and explaining gene contributions using a drug-cell-gene heterogeneous network.

DGDRPPython

A GNN-based deep learning model that performs drug-specific gene selection for improved drug response prediction.