Multiplexed Imaging
4 projects
Showing 4 of 4 projects
VivJavaScript
A WebGL-powered JavaScript library for interactive visualization of high-resolution multiplexed bioimaging data directly in the browser.
#scientific-visualization#hidivelab#viv
Stars351
Forks60
Last commit23 days ago
Ark-AnalysisJupyter Notebook
A Python toolbox for analyzing multiplexed imaging data, featuring segmentation, pixel/cell clustering, and spatial analysis.
#bioimage-analysis#data-science#deep-learning
Stars107
Forks31
Last commit6 months ago
MAPSJupyter Notebook
A machine learning approach for rapid, pathologist-level cell type annotation from spatial proteomics data like MIBI and CODEX.
#cell-type-annotation#computational-pathology#codex
Stars68
Forks10
Last commit2 years ago
MinervaHTML
A lightweight image viewer for non-experts to interactively explore complex multiplexed tissue images.
#scientific-visualization#microscopy#spatial-biology
Stars58
Forks14
Last commit2 years ago
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