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Multi Omics

5 projects

Showing 5 of 5 projects

scGPT
scGPTJupyter Notebook

A transformer-based foundation model pretrained on millions of single-cell profiles for generative AI tasks in single-cell multi-omics.

#reference-mapping#transformer-model#single-cell-analysis
Stars1.6k
Forks338
Last commit2 months ago
MOFA+
MOFA+R

A factor analysis framework for unsupervised integration of multi-omics datasets.

#transcriptomics#data-integration#mofa
Stars411
Forks63
Last commit5 days ago
UnitedNet
UnitedNetJupyter Notebook

An interpretable multi-task deep neural network for single-cell multi-omics integration and cross-modal analysis.

#neural-network#deep-learning#single-cell-analysis
Stars52
Forks17
Last commit2 years ago
BABEL
BABELJupyter Notebook

A deep learning model that translates between single-cell multi-omic profiles, such as scATAC-seq and scRNA-seq, using a shared latent representation.

#scrna-seq#cross-modality-translation#deep-learning
Stars50
Forks17
Last commit3 years ago
MOFGCN
MOFGCNPython

A deep learning model that predicts drug response by fusing multi-omics data with graph convolutional networks.

#deep-learning#graph-convolutional-networks#drug-response-prediction
Stars7
Forks3
Last commit3 years ago

Related Tags

#Bioinformatics5#Computational Biology4#Single Cell Analysis3#Deep Learning3
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