Imaging
Showing 10 of 10 projects
A high-performance, high-quality image processing pipeline for .NET, focused on making complex imaging tasks simple.
A complete pipeline for processing two-photon calcium imaging data, including registration, ROI detection, signal extraction, and spike deconvolution.
A MATLAB/Octave toolbox for processing High Dynamic Range (HDR) images, including tone mapping and expansion operators.
A WebGL-powered JavaScript library for interactive visualization of high-resolution multiplexed bioimaging data directly in the browser.
An open-source toolkit for federated learning and AI workflow management in medical imaging analysis.
Automated 3D cell detection and classification in large-scale volumetric brain images using deep learning.
A curated list of software, tools, pipelines, and plugins for image analysis in biological research.
A collection of tools and scripts to automate microscopy workflows in ZEN Blue using Python, APIs, and AI tools.
An algorithm that minimizes pixel-dependent noise from sCMOS cameras in microscopy images with arbitrary structures.
A Python package to quantify fiber alignment and density around cells in 3D fiber matrices as a proxy for cellular contractile forces.
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