Gene Expression
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scVeloPython
A scalable Python toolkit for RNA velocity analysis in single cells using dynamical modeling.
#transcriptomics#python-library#single-cell-rna-seq
Stars499
Forks112
Last commit2 months ago
scFoundationJupyter Notebook
A 100M-parameter foundation model for single-cell transcriptomics, enabling gene expression enhancement, drug response prediction, and perturbation analysis.
#deep-learning#drug-response-prediction#computational-biology
Stars410
Forks72
Last commit
scBERTPython
A BERT-based foundation model pretrained on large-scale scRNA-seq data for automated cell type annotation in single-cell analysis.
#transformer#performer-encoder#cell-type-annotation
Stars358
Forks69
Last commit2 years ago
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