Biomedical Research

GeneGPTPython

A tool-augmented LLM that uses NCBI Web APIs to answer biomedical questions with high accuracy and reduced hallucinations.

CellVit++Python

A vision transformer-based deep learning model for automated instance segmentation and classification of cell nuclei in histopathology images.

UsiigaciJupyter Notebook

A semi-automated pipeline for instance-aware cell segmentation, tracking, and migration analysis in phase contrast microscopy using Mask R-CNN.