Great inquiry into attacking RSA and it's internals, by Dan Boneh
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History and classification of the PAKE algorithms
Paper by R. Merkle, predated "New directions in cryptography" though it was published after it. The Diffie-Hellman key exchange is an implementation of such a Merkle system
Rather education explanation of every bit behind RSA
Dolev-Yao model is a formal model, used to prove properties of interactive cryptographic protocols